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RStudio

1. Set up X11 forwarding on the local machine:

To use the RStudio GUI, Charlie allows X11 forwarding. For X forwarding to function, your local machine has to be running an X server program. To set up a X server on the local machine, please refer to this page for a brief guide: https://kb.iu.edu/d/bdnt.

2. Connect to cfe with X11 forwarding option:

With Bigelow VPN,
run:
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ssh -Y <username>@cfe
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With no Bigelow VPN,
Use ssh port forwarding. For example, in the first terminal, to establish a connection to cfe, run:
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ssh -L 2200:cfe:22 <username>@sfe.bigelow.org
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Then, in the second terminal, connect to cfe by running:
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ssh -Y -p 2200 <username>@localhost
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3. Start an interactive session with X11 forwarding

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qsub -I -X -q route -l walltime=8:00:00 -l ncpus=2,mem=32G -N rstudio
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4. Load RStudio module

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module load rstudio
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5. Start RStudio

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rstudio
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Last modified 1yr ago