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Prokka
Julia Brown edited this page on Oct 15, 2018 · 1 revision
Prokka is available via SCGC's anaconda package.
To run:
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module load anaconda
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Then prokka is in your path.
An example prokka command:
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prokka --force --outdir {outdirectory} --prefix {prefix} --locustag {prefix} --cpus {cores_to_use} {input_fasta}
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