qsub -I -q route -l walltime=0:80:00 -l ncpus=4,mem=4G -N <username>-interactive
module use /mnt/scgc_nfs/opt/modulefiles/common
module load anaconda3
source activate anvio3Could also load anvi'o 4, see github page on running anvio
anvi-interactive -p SAMPLES-MERGED/PROFILE.db -c AM_ALLmeta_Norm_sccare.db --server-only -P 8099Choose a different port number if that one is taken or not working. You should see a screen that says the server is now listening to the port.
ssh -t -t [email protected] -L 8099:localhost:8099 ssh c# -L 8099:localhost:8099Replace username with your own user ID, c# with the charlie node that you are logged into (use chost to view node name) and whatever port you chose. You may see an error "bind: Cannot assign requested address" Ignore it. Do not close this terminal window.
http://localhost:8099 (of course changing the ports to match above.)